25 April 2012
Unidata Users Committee GRIB recommendations for WMO consideration
25 April 2012
DAP4 Commentary: DAP4 On-The-Wire Format
08 April 2012
The C++ libdap library uses what I will call an "eager" evaluation method. By this I mean that the whole packet is processed when received, is decomposed into its constituent parts (e.g. data arrays, sequence records, etc) and those parts are used to annotate the parsed DDS.
[Read More]netCDF Identifiers and Character Escape Mechanisms (sigh!)
04 April 2012
More and more, the netCDF API is being used as wrapper for a wide variety of other formats: HD5, HDF4, GRIB, BUFR, DAP2, DAP4, etc. During the process of defining translations to/from netCDF and these other format, it is necessary to implicitly or explicitly define netCDF identifiers from the schemas of these other formats.
The canonical example is HDF5. In HDF5, many API functions take a path, which is a sequence of identifiers separated by '/'. A path may be absolute ("/g1/g2/x") or relative ("y"). It appears to be the case that there is no way in HDF5 to specify an identifier containing '/', such cases are always interpreted as paths. So, if one naively defined, thru the netcdf-4 API, a variable named "/x/y", there is no apparent way to actually get this defined properly in HDF5. It is this fact that has led to the current, IMO undesirable, restriction that netCDF identifiers may not contain '/'.
This kind of "super-escaping" is very hard because in the worst case, we are likely to encounter the situation where legal identifier characters are restricted to something like the alphanumerics plus underscore.
DAP4 Commentary: DDX Lexical Elements
27 March 2012
Within the Relax-NG (rng) DAP4 grammar, there are markers for occurrences of primitive type such as integers, floats, or strings. The markers typically look like this when defining an attribute that can occur in the DAP4 DDX.
<attribute name="namespace"><data type="string"/></attribute>The "<data type="string"/>" specifies the lexical class for the values that this attribute can have. In this case, the namespace attribute is defined to have a String value. Similar notation is used for values occurring as text within an xml element. The lexical specification later in this document defines the legal lexical structure for such lexical items. Specifically, it defines the format of the following lexical items.
The specification is written using the ISO/IEC 9945-2:2003 Information technology -- Portable Operating System Interface (POSIX) -- Part 2: System Interfaces. This is the extended Posix regular expression specification.
I have augmented it in the following ways.
name = regular-expression
Basic character set definitions
CONTROLS = [x00-x1F] // ASCII control characters
WHITESPACE = [ f]+
HEXCHAR = [0-9a-zA-Z]
// ASCII printable characters
ASCII = [0-9a-zA-Z !"#$%&'()*+,-./:;<=>?@[]^_`|{}~]
Ascii characters that may appear unescaped in Identifiers
This is assumed to be basically all ASCII printable characters except the characters ' ', '.', '/', '"', ''', and '&'. Occurrences of these characters are assumed to be representable using the standard xml '&xx;' notation.
IDASCII = [0-9a-zA-Z!#$%'()*+,-:;<=>?@[]^_`|{}~]
The numeric classes: integer and float
INTEGER = {INT}|{UINT}|{HEXINT}
INT = [+-][0-9]+{INTTYPE}?
UINT = [0-9]+{INTTYPE}?
HEXINT = {HEXSTRING}{INTTYPE}?
INTTYPE = ([BbSsLl]|"ll"|"LL")
HEXSTRING = (0[xX]{HEXCHAR}+)
FLOAT = ({MANTISSA}{EXPONENT}?)|{NANINF}
EXPONENT = ([eE][+-]?[0-9]+)
MANTISSA = [+-]?[0-9]*.[0-9]*
NANINF = (-?inf|nan|NaN)
The Character classes
STRING = ([^"&]|{XMLESCAPE})*
CHARACTER = ([^'&]|{XMLESCAPE})
Note that the character type only supports ASCII characters because it can only hold a single 8-bit byte.
The Identifier class
ID = {IDCHAR}+
IDCHAR = ({IDASCII}|{XMLESCAPE}|{UTF8})
XMLESCAPE = &x{HEXCHAR}{HEXCHAR};
Note that the above lexical element classes are not disjoint. For example, the sequence of characters 1234 can be either an identifer,a float, or an integer. So the order of testing is assumed to be this.
The most correct (validating) version of UTF8 character set is as follows.
UTF8 = ([xC2-xDF][x80-xBF])The lines of the expression cover the UTF8 characters as follows:
| (xE0[xA0-xBF][x80-xBF])
| ([xE1-xEC][x80-xBF][x80-xBF])
| (xED[x80-x9F][x80-xBF])
| ([xEE-xEF][x80-xBF][x80-xBF])
| (xF0[x90-xBF][x80-xBF][x80-xBF])
| ([xF1-xF3][x80-xBF][x80-xBF][x80-xBF])
| (xF4[x80-x8F][x80-xBF][x80-xBF])
Note that ASCII and control characters are not included.
The above reference also defines some alternative regular expressions.
The most relaxed version of UTF8 is this.
UTF8 = ([xC0-xD6].)
|([xE0-xEF]..)
|([xF0-xF7]...)
The partially relaxed version of UTF8 is this.
UTF8 = ([xC0-xD6][x80-xBF])
| ([xE0-xEF][x80-xBF][x80-xBF])
| ([xF0-xF7][x80-xBF][x80-xBF][x80-xBF])
We deem it acceptable to use this last relaxed expression for validating UTF-8 character strings.